Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Gm17808-201ENSMUST00000200859 894 ntBASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf11bO08712 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Gm25016-201ENSMUST00000158399 131 ntBASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf11bO08712 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Gm29518-201ENSMUST00000190858 372 ntBASIC16.02■□□□□ 0.16
Tnfrsf11bO08712 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf11bO08712 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf11bO08712 Gm15794-201ENSMUST00000120182 631 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms