Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gpr146-202ENSMUST00000053120 1040 ntBASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC23.7■■□□□ 1.38
Pcf11G3X9Z4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 AC158982.1-201ENSMUST00000228377 901 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm7901-201ENSMUST00000120430 1597 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Nudt18-203ENSMUST00000228768 1578 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm22065-201ENSMUST00000103753 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm22066-201ENSMUST00000103761 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24932-201ENSMUST00000103763 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24115-201ENSMUST00000103799 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm22190-201ENSMUST00000103827 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm22191-201ENSMUST00000103831 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24721-201ENSMUST00000103849 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm28018-201ENSMUST00000103869 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm26399-201ENSMUST00000103937 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm15920-201ENSMUST00000118998 402 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm25349-201ENSMUST00000177728 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm23616-201ENSMUST00000177797 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm25871-201ENSMUST00000177816 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24752-201ENSMUST00000178240 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24496-201ENSMUST00000178287 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm25649-201ENSMUST00000178476 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm25548-201ENSMUST00000178681 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm23147-201ENSMUST00000178841 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm26095-201ENSMUST00000179270 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm22171-201ENSMUST00000179283 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm23936-201ENSMUST00000179354 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm22619-201ENSMUST00000179516 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm25255-201ENSMUST00000179579 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24755-201ENSMUST00000179691 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm26506-201ENSMUST00000179692 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm25086-201ENSMUST00000179931 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm23243-201ENSMUST00000180047 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24659-201ENSMUST00000180212 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm24169-201ENSMUST00000180244 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm23689-201ENSMUST00000180354 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm27359-201ENSMUST00000184153 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm27785-201ENSMUST00000184268 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm27466-201ENSMUST00000184396 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm27703-201ENSMUST00000184836 110 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm10154-201ENSMUST00000084445 354 ntBASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcf11G3X9Z4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcf11G3X9Z4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 AC139382.1-201ENSMUST00000221402 498 ntBASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcf11G3X9Z4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms