Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc1G3X9F6 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.02■□□□□ 0.63
Sh3tc1G3X9F6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc1G3X9F6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc1G3X9F6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc1G3X9F6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Gm7286-201ENSMUST00000182691 1007 ntBASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Gm11453-201ENSMUST00000117318 1007 ntBASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc1G3X9F6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc1G3X9F6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 AA543401-201ENSMUST00000164248 1269 ntBASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3tc1G3X9F6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms