Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.98■□□□□ 0.79
ScaperF8VQ70 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.98■□□□□ 0.79
ScaperF8VQ70 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.97■□□□□ 0.79
ScaperF8VQ70 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ScaperF8VQ70 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Gm17271-201ENSMUST00000165535 355 ntBASIC19.96■□□□□ 0.79
ScaperF8VQ70 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Gm5682-201ENSMUST00000173402 505 ntBASIC19.96■□□□□ 0.79
ScaperF8VQ70 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.96■□□□□ 0.79
ScaperF8VQ70 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ScaperF8VQ70 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
ScaperF8VQ70 Gm27646-201ENSMUST00000183989 110 ntBASIC19.95■□□□□ 0.79
ScaperF8VQ70 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.95■□□□□ 0.79
ScaperF8VQ70 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.95■□□□□ 0.79
ScaperF8VQ70 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.95■□□□□ 0.78
ScaperF8VQ70 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ScaperF8VQ70 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Mir6404-201ENSMUST00000183699 94 ntBASIC19.94■□□□□ 0.78
ScaperF8VQ70 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ScaperF8VQ70 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ScaperF8VQ70 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ScaperF8VQ70 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ScaperF8VQ70 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ScaperF8VQ70 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ScaperF8VQ70 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms