Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.46□□□□□ -0.09
TprF6ZDS4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.46□□□□□ -0.09
TprF6ZDS4 Gm37153-201ENSMUST00000193637 231 ntBASIC14.46□□□□□ -0.09
TprF6ZDS4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TprF6ZDS4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TprF6ZDS4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.45□□□□□ -0.1
TprF6ZDS4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Mir6404-201ENSMUST00000183699 94 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Gm36967-201ENSMUST00000193814 266 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Gm44719-201ENSMUST00000206404 149 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Gm6007-201ENSMUST00000208170 823 ntBASIC14.45□□□□□ -0.1
TprF6ZDS4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
TprF6ZDS4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TprF6ZDS4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TprF6ZDS4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.44□□□□□ -0.1
TprF6ZDS4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.44□□□□□ -0.1
TprF6ZDS4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.44□□□□□ -0.1
TprF6ZDS4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.44□□□□□ -0.1
TprF6ZDS4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.44□□□□□ -0.1
TprF6ZDS4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TprF6ZDS4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TprF6ZDS4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TprF6ZDS4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms