Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Gm15590-201ENSMUST00000078419 552 ntBASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb9E9Q5G2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Gm13036-201ENSMUST00000117799 748 ntBASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb9E9Q5G2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Pcdhb9E9Q5G2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb9E9Q5G2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb9E9Q5G2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb9E9Q5G2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb9E9Q5G2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb9E9Q5G2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms