Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm15678-201ENSMUST00000117573 960 ntBASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Asic1-205ENSMUST00000228185 1818 ntBASIC7.54□□□□□ -1.2
Rnf213E9Q555 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm8062-201ENSMUST00000139696 444 ntBASIC7.54□□□□□ -1.2
Rnf213E9Q555 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Cd63-ps-201ENSMUST00000145417 875 ntBASIC7.54□□□□□ -1.2
Rnf213E9Q555 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Gm20445-201ENSMUST00000061905 565 ntBASIC7.54□□□□□ -1.2
Rnf213E9Q555 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Rnf213E9Q555 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC7.53□□□□□ -1.2
Rnf213E9Q555 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC7.53□□□□□ -1.2
Rnf213E9Q555 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC7.53□□□□□ -1.2
Rnf213E9Q555 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC7.53□□□□□ -1.2
Rnf213E9Q555 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rnf213E9Q555 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC7.52□□□□□ -1.2
Rnf213E9Q555 Gm16570-201ENSMUST00000161951 436 ntBASIC7.52□□□□□ -1.2
Rnf213E9Q555 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC7.52□□□□□ -1.2
Rnf213E9Q555 Gm45195-201ENSMUST00000205597 1008 ntBASIC7.52□□□□□ -1.2
Rnf213E9Q555 Gm18049-201ENSMUST00000208909 581 ntBASIC7.52□□□□□ -1.2
Rnf213E9Q555 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rnf213E9Q555 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rnf213E9Q555 Gm6539-201ENSMUST00000119157 1064 ntBASIC7.52□□□□□ -1.21
Rnf213E9Q555 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC7.52□□□□□ -1.21
Rnf213E9Q555 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Rnf213E9Q555 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC7.52□□□□□ -1.21
Rnf213E9Q555 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms