Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-2D3Z4R4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx6-2D3Z4R4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx6-2D3Z4R4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.89□□□□□ -0.35
Nkx6-2D3Z4R4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Reep4-203ENSMUST00000226563 1444 ntBASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-2D3Z4R4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Gm13234-201ENSMUST00000120010 747 ntBASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms