Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx8D3YU81 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.72■□□□□ 0.27
Rfx8D3YU81 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Gm9172-201ENSMUST00000212092 954 ntBASIC16.72■□□□□ 0.27
Rfx8D3YU81 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
Rfx8D3YU81 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx8D3YU81 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.71■□□□□ 0.27
Rfx8D3YU81 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.71■□□□□ 0.27
Rfx8D3YU81 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx8D3YU81 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.71■□□□□ 0.27
Rfx8D3YU81 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.71■□□□□ 0.26
Rfx8D3YU81 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfx8D3YU81 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.7■□□□□ 0.26
Rfx8D3YU81 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rfx8D3YU81 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Rfx8D3YU81 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.69■□□□□ 0.26
Rfx8D3YU81 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Gm27867-201ENSMUST00000184778 125 ntBASIC16.69■□□□□ 0.26
Rfx8D3YU81 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx8D3YU81 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx8D3YU81 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms