Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h2abC0HKE1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Gm10231-201ENSMUST00000181584 441 ntBASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Gm5587-201ENSMUST00000206270 674 ntBASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Gm10175-202ENSMUST00000208752 441 ntBASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h2abC0HKE1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Gm25016-201ENSMUST00000158399 131 ntBASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h2abC0HKE1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.46□□□□□ -0.1
Hist1h2abC0HKE1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hist1h2abC0HKE1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms