Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Gm18115-201ENSMUST00000221209 621 ntBASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm12887B1AVM1 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm12887B1AVM1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm12887B1AVM1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms