Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3aA2ASI5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3aA2ASI5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3aA2ASI5 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.51■□□□□ 0.39
Scn3aA2ASI5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3aA2ASI5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.5■□□□□ 0.39
Scn3aA2ASI5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Gm9385-201ENSMUST00000117563 472 ntBASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Gm44335-201ENSMUST00000196879 141 ntBASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Gm44297-201ENSMUST00000198304 141 ntBASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Gm44346-201ENSMUST00000198851 141 ntBASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3aA2ASI5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Thap2-203ENSMUST00000218989 527 ntBASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Scn3aA2ASI5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Gm10499-201ENSMUST00000174094 934 ntBASIC17.47■□□□□ 0.39
Scn3aA2ASI5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Gm45612-201ENSMUST00000211320 160 ntBASIC17.47■□□□□ 0.39
Scn3aA2ASI5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3aA2ASI5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Scn3aA2ASI5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms