Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn1aA2APX8 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.47■□□□□ 0.23
Scn1aA2APX8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.47■□□□□ 0.23
Scn1aA2APX8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn1aA2APX8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm4899-201ENSMUST00000178708 719 ntBASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm27300-201ENSMUST00000184085 97 ntBASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm27335-201ENSMUST00000184758 97 ntBASIC16.46■□□□□ 0.23
Scn1aA2APX8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Gm10175-201ENSMUST00000086013 645 ntBASIC16.46■□□□□ 0.23
Scn1aA2APX8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn1aA2APX8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn1aA2APX8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Scn1aA2APX8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Scn1aA2APX8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn1aA2APX8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn1aA2APX8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Scn1aA2APX8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.45■□□□□ 0.22
Scn1aA2APX8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.45■□□□□ 0.22
Scn1aA2APX8 Gm18246-201ENSMUST00000221023 728 ntBASIC16.45■□□□□ 0.22
Scn1aA2APX8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Gm14494-201ENSMUST00000118786 435 ntBASIC16.44■□□□□ 0.22
Scn1aA2APX8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.44■□□□□ 0.22
Scn1aA2APX8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms