Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-9A0A140T8P4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-9A0A140T8P4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-9A0A140T8P4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Igkv3-9A0A140T8P4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-9A0A140T8P4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Gm11860-201ENSMUST00000122346 1010 ntBASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-9A0A140T8P4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
Igkv3-9A0A140T8P4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Igkv3-9A0A140T8P4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Igkv3-9A0A140T8P4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-9A0A140T8P4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms