Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ankra2-208ENSMUST00000226100 1476 ntBASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm27275-201ENSMUST00000184318 272 ntBASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms