Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm18421-201ENSMUST00000204122 625 ntBASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv3A0A0A6YYE2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm12134-201ENSMUST00000122109 520 ntBASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm7791-201ENSMUST00000219066 539 ntBASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv3A0A0A6YYE2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm12933-201ENSMUST00000120203 872 ntBASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms