Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbc1A0A0A6YWV4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbc1A0A0A6YWV4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbc1A0A0A6YWV4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms