Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm10566-201ENSMUST00000086739 996 ntBASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm11950-201ENSMUST00000121615 838 ntBASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-7A0A075B6B0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm9103-201ENSMUST00000119371 405 ntBASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm37722-201ENSMUST00000193757 208 ntBASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.22□□□□□ -0.45
Trav6d-7A0A075B6B0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6d-7A0A075B6B0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.21□□□□□ -0.46
Trav6d-7A0A075B6B0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-7A0A075B6B0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav6d-7A0A075B6B0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-7A0A075B6B0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6d-7A0A075B6B0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms