Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.23□□□□□ -0.45
Trav16A0A075B653 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.23□□□□□ -0.45
Trav16A0A075B653 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16A0A075B653 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.22□□□□□ -0.45
Trav16A0A075B653 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.22□□□□□ -0.45
Trav16A0A075B653 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Gm37856-201ENSMUST00000191634 999 ntBASIC12.22□□□□□ -0.45
Trav16A0A075B653 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav16A0A075B653 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16A0A075B653 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Gm5643-201ENSMUST00000117081 966 ntBASIC12.21□□□□□ -0.45
Trav16A0A075B653 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.21□□□□□ -0.45
Trav16A0A075B653 Gm12441-201ENSMUST00000121806 588 ntBASIC12.21□□□□□ -0.45
Trav16A0A075B653 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Gm18115-201ENSMUST00000221209 621 ntBASIC12.21□□□□□ -0.45
Trav16A0A075B653 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16A0A075B653 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Phf7-203ENSMUST00000226565 1971 ntBASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms