Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Gm11452-201ENSMUST00000122376 690 ntBASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-1A0A075B644 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Gm13884-201ENSMUST00000118103 829 ntBASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-1A0A075B644 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms