Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav8-1A0A075B641 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Gm11927-201ENSMUST00000118472 759 ntBASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms