Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms