Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav7n-4A0A075B620 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Gm11249-201ENSMUST00000117071 859 ntBASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Gm36967-201ENSMUST00000193814 266 ntBASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Il3ra-202ENSMUST00000223589 738 ntBASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7n-4A0A075B620 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms