Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav16d-dv11A0A075B617 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm12896-201ENSMUST00000118430 226 ntBASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav16d-dv11A0A075B617 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms