Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Gm13884-201ENSMUST00000118103 829 ntBASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Gm11452-201ENSMUST00000122376 690 ntBASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Gm44454-201ENSMUST00000198541 138 ntBASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13d-1A0A075B606 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Gm44771-201ENSMUST00000206975 626 ntBASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13d-1A0A075B606 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13d-1A0A075B606 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13d-1A0A075B606 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13d-1A0A075B606 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms