Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.16□□□□□ -0.46
PdfS4R2K0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.15□□□□□ -0.46
PdfS4R2K0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PdfS4R2K0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.15□□□□□ -0.46
PdfS4R2K0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PdfS4R2K0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.15□□□□□ -0.46
PdfS4R2K0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PdfS4R2K0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdfS4R2K0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
PdfS4R2K0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PdfS4R2K0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PdfS4R2K0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PdfS4R2K0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
PdfS4R2K0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Gm5417-201ENSMUST00000079706 384 ntBASIC12.13□□□□□ -0.47
PdfS4R2K0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PdfS4R2K0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PdfS4R2K0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdfS4R2K0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PdfS4R2K0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms