Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gm6433-201ENSMUST00000118634 875 ntBASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb3S4R1G7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Gm44430-201ENSMUST00000203376 995 ntBASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb3S4R1G7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Mir6982-201ENSMUST00000184354 68 ntBASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb3S4R1G7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms