Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Phf1Q9Z1B8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Gm36967-201ENSMUST00000193814 266 ntBASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Phf1Q9Z1B8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.53□□□□□ -0.08
Phf1Q9Z1B8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Phf1Q9Z1B8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Gm18733-201ENSMUST00000173950 856 ntBASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Gm5867-201ENSMUST00000063197 592 ntBASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Phf1Q9Z1B8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms