Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Gm27646-201ENSMUST00000183989 110 ntBASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Gm6550-201ENSMUST00000187574 993 ntBASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip2Q9Z0H8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Mir5126-201ENSMUST00000175513 77 ntBASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip2Q9Z0H8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 AW822252-206ENSMUST00000208904 237 ntBASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip2Q9Z0H8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip2Q9Z0H8 Gm7222-201ENSMUST00000117512 906 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms