Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CcsQ9WU84 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CcsQ9WU84 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CcsQ9WU84 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.33□□□□□ -0.44
CcsQ9WU84 Gm3375-201ENSMUST00000203929 796 ntBASIC12.33□□□□□ -0.44
CcsQ9WU84 Gm29791-202ENSMUST00000207888 369 ntBASIC12.33□□□□□ -0.44
CcsQ9WU84 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CcsQ9WU84 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcsQ9WU84 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Gm15565-201ENSMUST00000118890 427 ntBASIC12.32□□□□□ -0.44
CcsQ9WU84 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcsQ9WU84 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcsQ9WU84 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcsQ9WU84 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.31□□□□□ -0.44
CcsQ9WU84 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcsQ9WU84 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcsQ9WU84 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.31□□□□□ -0.44
CcsQ9WU84 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Gm10517-202ENSMUST00000192970 758 ntBASIC12.31□□□□□ -0.44
CcsQ9WU84 Gm4974-201ENSMUST00000209974 875 ntBASIC12.31□□□□□ -0.44
CcsQ9WU84 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms