Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx6Q9R1R0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Gm20949-201ENSMUST00000206478 952 ntBASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Gm9520-201ENSMUST00000209460 1253 ntBASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.93□□□□□ -0.02
Lhx6Q9R1R0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Gm13418-201ENSMUST00000119097 944 ntBASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx6Q9R1R0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Gm37533-201ENSMUST00000193848 545 ntBASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Gm37709-201ENSMUST00000195074 600 ntBASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx6Q9R1R0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms