Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Gm7977-201ENSMUST00000193787 748 ntBASIC16.1■□□□□ 0.17
RpgrQ9R0X5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RpgrQ9R0X5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Gm6623-201ENSMUST00000173570 544 ntBASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RpgrQ9R0X5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RpgrQ9R0X5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RpgrQ9R0X5 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.08■□□□□ 0.17
RpgrQ9R0X5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RpgrQ9R0X5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RpgrQ9R0X5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RpgrQ9R0X5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RpgrQ9R0X5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Gm45328-201ENSMUST00000210942 917 ntBASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RpgrQ9R0X5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms