Protein–RNA interactions for Protein: Q9QY53

Nphp1, Nephrocystin-1, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp1Q9QY53 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp1Q9QY53 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp1Q9QY53 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp1Q9QY53 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp1Q9QY53 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nphp1Q9QY53 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp1Q9QY53 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 App-207ENSMUST00000227737 2827 ntBASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Gm24589-201ENSMUST00000116692 94 ntBASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Gm27459-201ENSMUST00000184860 107 ntBASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Gm18622-201ENSMUST00000219361 595 ntBASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Prob1-201ENSMUST00000097619 3021 ntBASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp1Q9QY53 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp1Q9QY53 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp1Q9QY53 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp1Q9QY53 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp1Q9QY53 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp1Q9QY53 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp1Q9QY53 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nphp1Q9QY53 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms