Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm4Q9QXA5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Gm7213-201ENSMUST00000215977 950 ntBASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm4Q9QXA5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm4Q9QXA5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms