Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sec61a2Q9JLR1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sec61a2Q9JLR1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Gm14859-201ENSMUST00000117752 357 ntBASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61a2Q9JLR1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61a2Q9JLR1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms