Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Gm27622-201ENSMUST00000183779 60 ntBASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn5aQ9JJV9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Mir449b-201ENSMUST00000104833 80 ntBASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Gm16198-201ENSMUST00000118766 670 ntBASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn5aQ9JJV9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn5aQ9JJV9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Scn5aQ9JJV9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn5aQ9JJV9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn5aQ9JJV9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Scn5aQ9JJV9 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.2■□□□□ 0.18
Scn5aQ9JJV9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms