Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Gm22697-201ENSMUST00000175194 63 ntBASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl28Q9JIL2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gm18101-201ENSMUST00000215769 548 ntBASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl28Q9JIL2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms