Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn3Q9ES97 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Gm10052-201ENSMUST00000168019 960 ntBASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Gm7729-201ENSMUST00000050143 801 ntBASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.84■□□□□ 0.29
Rtn3Q9ES97 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.84■□□□□ 0.29
Rtn3Q9ES97 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtn3Q9ES97 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn3Q9ES97 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn3Q9ES97 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn3Q9ES97 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn3Q9ES97 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn3Q9ES97 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn3Q9ES97 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn3Q9ES97 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms