Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Mir6404-201ENSMUST00000183699 94 ntBASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps35Q9EQH3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Vps35Q9EQH3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps35Q9EQH3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Gm15165-201ENSMUST00000118140 502 ntBASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps35Q9EQH3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms