Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Gm20445-201ENSMUST00000061905 565 ntBASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Grk6-207ENSMUST00000225925 2769 ntBASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Upf1Q9EPU0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Upf1Q9EPU0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Upf1Q9EPU0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.83■□□□□ 0.45
Upf1Q9EPU0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Upf1Q9EPU0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Upf1Q9EPU0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Upf1Q9EPU0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gm15198-201ENSMUST00000117283 177 ntBASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gm13392-201ENSMUST00000117708 150 ntBASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gm42693-201ENSMUST00000196779 631 ntBASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.82■□□□□ 0.44
Upf1Q9EPU0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Upf1Q9EPU0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.81■□□□□ 0.44
Upf1Q9EPU0 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.81■□□□□ 0.44
Upf1Q9EPU0 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Olfr582-201ENSMUST00000098212 960 ntBASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Upf1Q9EPU0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.8■□□□□ 0.44
Upf1Q9EPU0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upf1Q9EPU0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms