Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.52■□□□□ 0.23
Chmp2aQ9DB34 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Gm24589-201ENSMUST00000116692 94 ntBASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Gm25745-201ENSMUST00000174945 133 ntBASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp2aQ9DB34 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp2aQ9DB34 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp2aQ9DB34 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Gm34391-201ENSMUST00000203706 907 ntBASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms