Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Gm4899-201ENSMUST00000178708 719 ntBASIC18.8■□□□□ 0.6
Stag1Q9D3E6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Gm23935-201ENSMUST00000102303 57 ntBASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Gm24270-201ENSMUST00000102326 57 ntBASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Gm24245-201ENSMUST00000157318 57 ntBASIC18.79■□□□□ 0.6
Stag1Q9D3E6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Mir3113-201ENSMUST00000175478 76 ntBASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Mir8117-201ENSMUST00000184773 107 ntBASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stag1Q9D3E6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Gm25911-201ENSMUST00000157621 56 ntBASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Gm19164-201ENSMUST00000210667 640 ntBASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stag1Q9D3E6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Gm14822-201ENSMUST00000122247 291 ntBASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Gm27300-201ENSMUST00000184085 97 ntBASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Gm27335-201ENSMUST00000184758 97 ntBASIC18.77■□□□□ 0.6
Stag1Q9D3E6 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.77■□□□□ 0.6
Stag1Q9D3E6 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
Stag1Q9D3E6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms