Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Snf8Q9CZ28 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snf8Q9CZ28 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snf8Q9CZ28 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Snf8Q9CZ28 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snf8Q9CZ28 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Snf8Q9CZ28 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Mir6982-201ENSMUST00000184354 68 ntBASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snf8Q9CZ28 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snf8Q9CZ28 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Snf8Q9CZ28 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms