Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.9■□□□□ 0.14
Retreg3Q9CQV4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Gm13884-201ENSMUST00000118103 829 ntBASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Prob1-201ENSMUST00000097619 3021 ntBASIC15.89■□□□□ 0.13
Retreg3Q9CQV4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retreg3Q9CQV4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Gm12644-201ENSMUST00000119935 606 ntBASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Gm6257-201ENSMUST00000163864 910 ntBASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Gm2594-201ENSMUST00000214774 742 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms