Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rer1Q9CQU3 App-207ENSMUST00000227737 2827 ntBASIC12.98□□□□□ -0.33
Rer1Q9CQU3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Rer1Q9CQU3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rer1Q9CQU3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rer1Q9CQU3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Mir770-201ENSMUST00000103252 94 ntBASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Gm10013-201ENSMUST00000106074 672 ntBASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms