Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Wdr70-203ENSMUST00000227371 1130 ntBASIC12□□□□□ -0.49
Chchd1Q9CQA6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Gm10655-201ENSMUST00000098658 1397 ntBASIC12□□□□□ -0.49
Chchd1Q9CQA6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Chchd1Q9CQA6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chchd1Q9CQA6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms