Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh15Q99PJ1 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Gm27920-201ENSMUST00000183953 96 ntBASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Gm18737-201ENSMUST00000173594 937 ntBASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh15Q99PJ1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Gm8410-201ENSMUST00000117225 605 ntBASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Gm24694-201ENSMUST00000180054 110 ntBASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Gm27663-201ENSMUST00000184839 110 ntBASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh15Q99PJ1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Gm25857-201ENSMUST00000082788 129 ntBASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Gm9824-201ENSMUST00000178707 561 ntBASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh15Q99PJ1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Gm11543-201ENSMUST00000120758 370 ntBASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh15Q99PJ1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm27533-201ENSMUST00000183800 152 ntBASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm14767-201ENSMUST00000121559 586 ntBASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh15Q99PJ1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms