Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Gm4899-201ENSMUST00000178708 719 ntBASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col25a1Q99MQ5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col25a1Q99MQ5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col25a1Q99MQ5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.33■□□□□ 0.21
Col25a1Q99MQ5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col25a1Q99MQ5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Rprl2-201ENSMUST00000157150 290 ntBASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Mir3102-201ENSMUST00000175555 104 ntBASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Gm7730-201ENSMUST00000212486 454 ntBASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col25a1Q99MQ5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.31■□□□□ 0.2
Col25a1Q99MQ5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms