Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.85□□□□□ -0.19
Scrt1Q99M85 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.85□□□□□ -0.19
Scrt1Q99M85 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.85□□□□□ -0.19
Scrt1Q99M85 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.85□□□□□ -0.19
Scrt1Q99M85 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.85□□□□□ -0.19
Scrt1Q99M85 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Gm10175-201ENSMUST00000086013 645 ntBASIC13.85□□□□□ -0.19
Scrt1Q99M85 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scrt1Q99M85 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scrt1Q99M85 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.84□□□□□ -0.19
Scrt1Q99M85 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scrt1Q99M85 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scrt1Q99M85 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Scrt1Q99M85 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Gm4459-201ENSMUST00000118750 468 ntBASIC13.83□□□□□ -0.2
Scrt1Q99M85 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.83□□□□□ -0.2
Scrt1Q99M85 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.83□□□□□ -0.2
Scrt1Q99M85 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.83□□□□□ -0.2
Scrt1Q99M85 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.83□□□□□ -0.2
Scrt1Q99M85 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scrt1Q99M85 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.82□□□□□ -0.2
Scrt1Q99M85 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms