Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk5rap3Q99LM2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Gm6433-201ENSMUST00000118634 875 ntBASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk5rap3Q99LM2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdk5rap3Q99LM2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdk5rap3Q99LM2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdk5rap3Q99LM2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdk5rap3Q99LM2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Gm18032-201ENSMUST00000222541 538 ntBASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk5rap3Q99LM2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms